Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892356.1_cds_XP_016447226.1_42007
CDS Infomation

[gene=LOC107772248] [db_xref=GeneID:107772248] [protein=calnexin homolog 1-like] [protein_id=XP_016447226.1] [location=join(303..395,487..556,1833..2956,3053..3124,3204..3323,3457..3597)] [gbkey=CDS]
Sequence

ATGAAAGAGCAGAATCGGAGGATGTGGACGCAATATGCACTGTTGCTATTGGCCGGTTGC
TTCGTCTCTCAACTCTACGCCTCTTCAGATGTGAAAATTTACGAGTCATTCGATGAGGCA
TTTGATGGGCGTTGGATTGTGTCTGAGAAAGAGGACTATAATGGTGCGTGGAAACATGCC
AAGAGTGAAGGGCATGATGACTATGGGCTTCTTGTGAGTGAAAAGGCAAGGAAATATGCT
ATTGTCAAGGAGCTTGACGATGTTGTCGACCTCAAAGATGGAGCTGTGGTTCTTCAATAT
GAAGTTCGCCTCCAGGATGGACTTGAATGTGGTGGTGCTTATCTTAAATACCTCCGGCCC
CAAGAGGCAGGTTGGATTCCCAAGGAATTCAACAACGAGTCTCCCTATACTATAATGTTT
GGACCAGATAAATGTGGAACCACAAACAAGGTTCACTTCATCTTGAAACACAAGAATCCT
AAGAGTGGGGAGTACATCGAACACCACCTTAAGTTTCCACCATCTGTACCTTCTGACAAA
CTAACCCATGTCTACACTGCTGTGCTGAAATCGGACAACGAGTTGCTGATCTTGATTGAC
GGGGAAGAGAAAAAGAAGGCAAACTTCCTTTCAGCTGATGATTTTGAGCCACCTCTCATT
CCTGCAGAGACCATTCCAGATCCAGAAGATAAGAAGCCTGAGGGCTGGGATGAGAGGGCA
AAAATTCCAGACCCAGATGCTAAGAAACCAGATGATTGGGACGAGGATGCACCAATGGAA
ATTGAAGATGAAGATGCTGAGAAGCCCGAGGGATGGTTGGATGACGAACCTGAAGAGATA
GATGATCCTGAGGCAACAAAGCCTGAAGATTGGGTTGATGAGGAAGATGGTGAATGGGAG
GCTCCAAAAATTGATAACCCGAAGTGTGCAGAAGGCCCTGGATGTGGGGAGTGGAAAAGA
CCAATGAAGAGCAATCCAGCTTACAAGGGAAAATGGCATGCTCCACTGATTGACAATCCC
AATTACAAGGGTATTTGGAAGCCAAGGGATATTCCAAATCCTAACTATTTCGAACTCGAC
AGGCCGAATTTCGAGCCTATTGCAGCAATTGGCATTGAAATCTGGACAATGCAGGATGGT
ATATTATTTGACAATATCTTGATAGCAAGTGATGAGAAGGTTGCAGAATCATACAGGAAG
ACTGCATGGAAGCCCAAGTTTGATGCAGAGAAGGTAAAACAGAAGGCTGAGGAAGTAGCA
AACTCTGGTGGGCTCAAAGGATTCCAGAAAGTGGTATTTGATCTTCTCTACAAGGTGGCT
GACATCCCCTTGTTGGGTGAGCACAAGTCCAAAGTACTGGATCTTCTTGCGAAGGCCGAG
ACACAGCCTAATCTCACAGTTGGTGTTGTCATTTCAATCATAATTGTCATTTTCACAGTT
CTCTTGAAGCTCATCTTTGGCGGGAAGAAGCAGCAACCTGCAAGAGCTACTGCAGAGCCT
AAGAAAAGTGATGGTGCTGAGGCATCAACTTCTAACAACGAAGGAGCTACAGAGGAGAAA
GAAGAGCAGAATGAGGATGCTGCCGCTGCTCCTCGTAGGAGGACTAGACGTGATAATTAG

Peptide Sequence

PEP ID

XP_016447226.1
PEP Infomation

PREDICTED: calnexin homolog 1-like [Nicotiana tabacum]
Sequence

MKEQNRRMWTQYALLLLAGCFVSQLYASSDVKIYESFDEAFDGRWIVSEKEDYNGAWKHA
KSEGHDDYGLLVSEKARKYAIVKELDDVVDLKDGAVVLQYEVRLQDGLECGGAYLKYLRP
QEAGWIPKEFNNESPYTIMFGPDKCGTTNKVHFILKHKNPKSGEYIEHHLKFPPSVPSDK
LTHVYTAVLKSDNELLILIDGEEKKKANFLSADDFEPPLIPAETIPDPEDKKPEGWDERA
KIPDPDAKKPDDWDEDAPMEIEDEDAEKPEGWLDDEPEEIDDPEATKPEDWVDEEDGEWE
APKIDNPKCAEGPGCGEWKRPMKSNPAYKGKWHAPLIDNPNYKGIWKPRDIPNPNYFELD
RPNFEPIAAIGIEIWTMQDGILFDNILIASDEKVAESYRKTAWKPKFDAEKVKQKAEEVA
NSGGLKGFQKVVFDLLYKVADIPLLGEHKSKVLDLLAKAETQPNLTVGVVISIIIVIFTV
LLKLIFGGKKQQPARATAEPKKSDGAEASTSNNEGATEEKEEQNEDAAAAPRRRTRRDN

Transcript Sequence

Gene sequence data has not been registered.